| Free Softwares |
| Alscript |
Program to format multiple sequence alignments |
| Amplify |
Macintosh program for simulating and testing PCRs |
| Biocatalogue |
Software directory of general interest in molecular biology
and genetics, at EBI |
| Bioexplorer
Toolbar |
Fastest and easiest way to get the information you want
from NCBI databases |
| Biostatistics |
Biostatistics software |
| Biotech Resource |
Free softwares for moleular biology and structural biology |
| BLAST at NCBI |
Blast open source software |
| Cn3D |
Application that allows to view 3D structures, at NCBI |
CLC Bio
|
Basic bioinformatics analyses and data management
- free download
|
| DomainParser |
A protein domain partition program |
| EMBOSS |
EMBOSS is a package of FREE open source software for sequence
analysis |
| eXtropia |
Several free web tools |
| Fasta |
Open source for Fasta |
| Genamics |
Database of freely-distributable and commercial tools for
use in molecular biology |
| GeneDoc |
Multiple sequence alignment editor,
analyzer & shading utility for windows |
| Globin |
Several free tools |
| GNU |
Free software foundation - several tools |
| HMMER |
HMMER 2.2 Profile hidden Markov models for biological sequence
analysis |
| NIH Image |
Image analysis program for Macintosh from NIH |
| MatInspector |
Detection of transcription factor
binding sites |
| Matt's Script Archive |
Several free Perl scripts |
| MB
Shotcuts |
List of several free molecular biology softwares |
| MolBio Links |
Links to several molecular biology toos |
| Molecular
Biology |
List of many free software package for Mac and PC |
| Multicoil |
Program to predict coiled coil
regions in proteins |
MUSCLE
|
Protein Multiple Sequence Alignment
Software
|
| MutationSurveyor & MutationExplorer |
Analysis of DNA variants, SNPs and mutations
|
| Open Informatics |
Open source softwares |
| Phred, Phrap & Consed |
Sequence quality and assembly softwares |
PolyPhred
|
Compares traces to identify
heterozygous sites for SNPs |
PhysioNet
|
Collection of physiologic simulation software
|
| PovChem |
Visualization program for PDB protein
structures |
| Prospect |
A threading-based protein structure
prediction system |
| R - statistical
package |
Statistical computing and graphics software |
| TreeView |
Tree drawing software for Apple Macintosh
and Windows |
| SourceForge.net |
Several ready to use tool |
| Staden Package |
A excellent package for sequence analysis and assembly |
| Sequence
Manipulation |
Free suite of sequence manipulation tools |
| WU-BLAST |
Washington university BLAST archives |
|
|
|
Miscellaneous
|
BioPAX
|
Develop a common exchange format for biological
pathways data.
|
| Genesis |
Information about GEneral NEural SImulation System |
| E-cell |
Simulating intracellular molecular processes of living cells
project |
| CodeBits.com |
Find building blocks for your programming needs in many
languages |
| ItKnowledge |
Read or search the full-text of technical and computer books,
tutorials and guides |
| Programming
Libraries |
Bioinformatics Programming Libraries, links to lots of sites
and source codes |
| Banbury |
Gene identification software benchmarking
site |
| BIONLP.org |
Natural language processing of biology text |
Global Grid
Forum
|
Distributed computing
|
| Linux.org |
Linux is a free Unix-type operating system |
| Linux BC |
Linux user group in British Columbia |
| Icon Bank |
Icon, button, background or line to spice up your website |
| NodalPoint |
Culture, molecular biology, biotechnology, linux and bioinformatics
news |
SBML
|
The systems biology markup language
|
| WinFiles |
Lots of windows related information from CNET |
